CDS
| Accession Number | TCMCG007C00015 |
| gbkey | CDS |
| Protein Id | XP_033138412.1 |
| Location | join(47080..47178,47258..47540,47609..47837,47918..48242,48436..48552,48643..48771,48847..49041,49124..49318,49434..49571,49668..49790,49868..50121,50226..50329,50605..50699,50786..51007,51292..51471,51557..51629,51711..51778,51906..52051,52132..52240,52328..52474,52574..52621,52696..52824,52928..53170,53258..53395,53485..53570,53670..53775,54030..54125,54252..54404,54581..54763,54839..55068,55164..55266,55349..55477,55572..55616,55824..56018,56236..56362,56436..56536,56729..56866,56942..57025,57347..57493,57582..57713,57816..57863,57934..58080,58166..58227,58391..58544,58653..58844,58927..59031,59121..59255,59339..59539,59644..59895) |
| Gene | LOC103844691 |
| GeneID | 103844691 |
| Organism | Brassica rapa |
Protein
| Length | 2379aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_033282521.1 |
| Definition | CCR4-NOT transcription complex subunit 1 isoform X1 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Domain of unknown function (DUF3819) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12604
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGTGATGAACCCGTCCAAGGTCGCAGGCCATGCCCGGTTCTTACTCGAGAGCTTTAGCGATTCCGAAGTTGATTCAATCGCCCAAGAGATCTGTCAGCTGGTTGAGTATGGTGTTGAGACAAGCATTCCAGTTCTCAAGACATGCTTAGATTGCTTCGCCGCCCGTCGAAGCCATCCTAATACCTCGCAGCTTGAGAAACTAATATCCTTGGTCTTTAAACGTGTCCTGAAACACTCTAATCTCATTTCTCACGCCCTTCAAGATGTCGAGGTCACTGATGAGTTCGTGGCTGATTTGACTAATGCTCTCGACTTTTCAATCTCTGACAAAATTAGCTTTGCTCTGTCTCTAGCCGAGTCTGATGATGCAAACGCAGCTGGTCGAAACTTATTATTGGCCATGATTGAGCAACTGTGTGCCAATTCTGCCCAGATTGAGTCAACCGAGCAAGTTCAGAATATTCTTTTGTTTCTCCAGACATCTGAGGACCTCTCCACCCATCTTACTTCCTTCTTACAGATTTTGTCTTCTACTCAACCCAAAGATGACTTCTCTTTTGCTCTTACTCCTATCCTTTCTCAACAGCTTCACCAAGCTGATGTTTTAAGGAGCATCGATTTTCACACTGAGTTTGATTCTATCTTAGCTGAAATCGACAAGGAAATTTCTGTTGGAGATCTTATGGGAGAATTAGGTTGTGGTGTTACTGCTGATGCACAACAATGCAGAGATATCTTGTCTAGTTTCGCACCATTAACAGAGGCTACTATCTCAAGGATTCTTGCTAATGTTGCTCGTACCTGTGCTGATCTCGAAGATAACCACACCACCTTTTCAACATTTAGTCTGGTCCTTGGTTGCTGCATTCCCACTGAACTTTCCACTCCAATGTCGTGGAGTGTTGACATCTTAATTGAGACAATCAAGCAACTTCAGGCTCCTGGCACAAGCTGGAGGAAAGTAATCGAGAATCTTGACCATAGTGGATTTGATATCCCCAATAAGGAGTCTTTCTCGTTTTTCATGCGGCTATATAAAACTGCTTCCCAGGACCCGTTTCCTCTTGATGCTGTATGCGGTTCTGTCTGGAAAAATGTGGAAGGTCAAATATCGTTTCTTAAATATGCAATAGCATCCCCACCAGAAGTATTCACCTTTATGCATTCTCCCAGGAAGCTGGTATATATTGACGATAACATGCACAGCCATGAGCATCAATTAGGACTTTCCAATGAAGCATGGCTATCTCTCGATCTCTTAGATGTCTTATGCCAACTAGCTGAGAGAGGTCATACTGTTTTAGTTAGTTCGCTGCTCCAGTATCCACTCGCACAGTGTCCCAAAACCTTGCTTACTGGAATGACACACATCAAAACTGCCTATAATCTCATTCAGCGAGAGGTTGTTTCTGCTATTCTTCCAGTGATAATTACGAACTCACAGGATAGTGGTTTTATCCTTAATCTTTGGCATCAGAATACTGAGCTTGTTCTGTGGGGGATTTTAAAGGCCCAAAATCTAAAAGCAGACCGCATACTCAATTTAATTGATATCTGCCATGAACTGAAGGTTCTTTCTGTTGTTTTAGAATCGGTTCCAATCTCATTCAGCATCAGATTGGCAGTCCTTGCCTCACTGAGAGGCTATTTGGACATCGAGAACTGGTTGCCAAACGTTCTATGTGTGTATAAAGACCTCTTTGCGGAGGAATGTCTCAAGTTTGTCAAAAATGTGCATTTTAGCGAATCAGAGGATTTTACTTCCCAACATTTCCATCCTTCTGATCCGTTATCAGATGTTCATTTGGATGCAACGACTTCGCTTTTGAAAGTTTTGAAAGCTCATGACAATGTGATAACTTCATCTCAACTGGTCGATGAGATAGAAAAGGTCAATGCAGCAATCTTGGATTGTAATTCTAAACTGCAGAATGGTGAGGCTAAAGTTTCATCAGCTTCGAATGCATATGGAGACGATATTGAGGCAGAAGCGAACGCTTATTTCCATCAAATGTTTTCGGGTCAGTTGAGTGTTGATGCAATGGTTCAAATGCTTTCGCGATACAAGGACTCCTCGGTTCAAAGGGAAAAATCAATTTTTGATTGCATGATTGCTAATCTGTTCGAGGAATATCGTTTTTTCCCCAAGTATCCCGAGAGGCAGCTAAAAATAGCCTCCATCCTTTTTGGCTCTGTTATCAAGCACCAGCTTATAAGTTCTCTCACACTTGGGATGGCACTGCGTTTAGTCTTGGATTCTTTGCGTAAACCTGCAGATTCAAAAATGTTTCTGTTTGGAAGCAAAGCTCTGGAACAGTTCGTGAATCGTCTGGTTGAATTGCCTCAGTACTGTAACCATATTTTGCAAATATCTCATCTGCGTAGCACTCACCCCGAGTTAGTCACTGTTATTGAACAAGCACTTTCAAGGATATCATCTGGTAATTTAGAATCAGAGGCAGTTTCGAACCCTGGTCCTTCACAGTCTTTCCCTGGAAATGGCGAGTTTAGTGGTTCTGGAATTGGCCAGTCTGCTCTCCAACTTCCTTTACCTGTACAGTCTCAACAGAAAAATGAAGTGCACATTAATGACAACAGCAGAGTGCCAAGTGTGCCATCTATCGAAGCAAAGACACTTCTGCCCTCTTCATCTACTACTTCCGCTGATGTTTCTGTCATTCCTAAGAATCCTGGTATTTCGACTTCTTCATTAACTTCAGCTGGTATTGTTCGTCCCGCTCGTGGAGCCACTTCGACAAGGTTTGGGTCTGCTTTGAACATAGAGACCCTGGTTGCAGCAGCAGAGAGAAGGGAAAACGCAATAGAGATTCCACCTTCAGATGTTCAGGACAAAATTTCTTTCATAATCAATAATATCTCTACAGCCAATATTGAATCCAAGGGGAAAGAGTTCGCTGAGATTTTGCCTCAACAGTACTATCCCTGGTTCGCTCAGTATATGGTTATGAAAAGAGCGAGCATTGAGCCCAATTTTCATGATTTGTACTTGAAATTCTTGGACAAAGTTGATTCCAAGCTGTTGTTTAAGGAGATACTTCAAAATACTTACGAAAATTGCAAGGTTCTCTTGGGTTCAGAGCTCATAAAGTCAAGTTCGGAAGAGCGATCTCTGCTCAAAAATTTAGGCAGTTGGCTTGGAAAATTGACCATTGGAAGGAATTATGTTTTGAGGGCGCGAGAAATTGATCCAAAATCCTTAATTGTGGAGGCATATGAAAAAGGGTTGATGATTGCAGTCATTCCATTTACTTCAAAGGTTCTGGAGCCATGCCAAATGAGTATTGCGTATCAGCCTCCCAATCCTTGGACAATGGCTATACTCGGGTTGCTCGCTGAGATTTATTCAATGCCGAACCTTAAAATGAATCTGAAGTTTGACATAGAGGTTTTATTCAAGAACCTTGGTGTTGATTTGAAGGAAGTAGCGCCGACTTCCCTTCTAAAGGACCGGAAGAGAGAAATAGATGGGAATCCTGATTTTAGCAACAAAGATCTTGGAGTAACACATATATCTCAACCACAGATAATCCAAGAGCCGAAAACAATTTCTCCTCTTAAGCAAATAGACCTGCCTCTGGATGTTGCAGATTCACCTAATACAGACGATTCCTCGAAGTTATTATCACAGTATGTAGCCCCTCAACGTGTATATACTAATACTTTGATGGAAGACGAAAAAGTTTCCCATTTAGGCTTGTCTGATCAGCTTCCATCACCTCAAGGACTGTTCCCGTCAACTCCATCCCCATTGTTTTCTATTAGCCAGCTGTCAGCAGCACTTCCCAATATTGGAAATCATGTTGTTATTAATCAGAAATTAAGCGGATTTGCTCTGCACTTCCCATTTCATAGAGTGGTACCACTTGCCATGGACAGAGCTATCAAGGAGATTGTGTCTGGTATTGTTCAGCGAAGTGTATGTGTTGCTTGCCAAACAACAAAAGAACTTGTGCTGAAGGATTATACCTTGGAACCAGATGAGACACGTATATATAATGCGGCTCACTTGATGGTTGCTAGTCTAGCTGGGAGTTTGGCCCATGTGACGTGCAAGGAACCCCTGCGCACTTCAATATCAGGTCATCTACGGAATTCGCTCCAGGGGATGAATATTAAAAATGAAGCTCTTGAACAAATTGTGCAACTTGTCACCAATGACAACCTTGATTTGGGTTGTGCTGCCATTGAACAGGCGGCTACAGAGAAGGCAATACAAACTATTGATGCGGACATTGACCAGCAATTGTCGTTACGGAAAAAGCATAGAGATGGTGCCGGATCCTCCCTTTTTGATCCGAACATGCTATCGCAGAATTCTGTTAGTTTTATACCAGAGTCCCTCCGTCCAAAACCGGGACATCTATCCCTGTCTCAACAGCGAGTTTATGAGGACTTTGTTCAGCTTCCTTGGCAAAAGCAGACAACTCAAACTTCTCACGGTTTATCTGCCGCTTCAAGCTCATCTGGCGATGTTGGGCTTAGTAGTAGTTATGGTCCAGCATCAGGTAAAAGTGCTTCGGACTTTTTGTCTAGTGCTCGAAACGCTCGGATGGATAACGTCTCCCAGCCATTGGATATCTCTGTGGAGGGTTTTGAATCTCCTCCAGTTTCACTTTTAAGCTCACAAGTTGATCCAGCTGTTGACACGGCCGGTCTTCAGTTCTCTAAATCCCTTTCGACCTCTGAATTGAGCCTGGTTGAATCCTCTGACACCGCTATGAAAGAAACTGGAGCATCATTGCAGACTTTGACTTCAGCTGCTACCATGGAGCGTCTTGGTGGAAATAATATTATACAGCCTTCTCTGTCCACGAGAGATGCACTAGAAAAGTATCATATTGTTACTCAGAAGATGGAGGACTTAGTGGCTAATATTGCAGGAGATGATGAAATTCAGGCTGTAGTTTCTGAAGTTCCTGAAATCATCCTCAGATGTATAAGCAGAGACGAAGCTGCCTTGGCTGTCGCCCAAAAAGCTTTCAAGGCTCTTTATGACAATGCATCAAGTAACCTTCACGTCAGTGCTAACCTAGCAATTCTTGTGGCTGTTCGAGATGTTTGCAAGCGTGTTGTTAAAGAGCTCACTAGTTGGGTGATATATTCAGAGGAGGAGCGGAAGCTTAACAAAGACATTACTATCGGTCTTATCCAACGCGAGTTACTTAACCTAGCGGAGTACAATGTCCACATGGCGAAGTATCTTGATGGAGGGAGAAACAAAAGCGCCACTGACTTTTCTATTTCTCTACTCCAATCCTTGGTCACTGAGGAGTCAAGTGTCATTTCAGAGCTACACAGTCTTGTTGATGCACTGGCAAAGCTTTCCTCAAAATATGGATCTCCCGAGTCATTGCAACAACTAATTGACATCATACGAAATCCAGTTACTAACACAAGTGATCACTCTAATAGCGCAATCGGAATTGAGAACAATGATAAGCAATCAAAGGATAAAAAGGTTGTGTGCAATACCACCGCTAACACAGAAGAGAACACCAACTTGGAATTTGTGGAATCAGAGTCTGCGGGTTTCCGGAGTCGGGTGTCCACACTTTTTGAAAGCTGGTATCAGATCTGCGAAGTTTCTGGTGCAAATGAAACCGCTTGCTCACAATACGTGTTGCATTTACATGAAACTGGACTACTTAAGGGAGATAATACAACAGAGAGTTTTTTCCGAATTCTTCTGGAACTTTCTGTTGCTCATTGTATATCTTCTGAAGAAATTAGTTCTGGTGCTGTGCAATCTCCTCAGCAAGCTCAGAGTCCATCATTCCTTATCATTGATATTTATGCCAAACTTGTTTTCTCGATCTTGAAGTATCTCCCGGAACAGGAGTCGAGCAGCAAGTTATTTCTTCTGTCGGAGATCATGGCTGTTACTGTGAGATCTATTCAAAAAGATGCAGAAGATAAAAAGACATCACTCAATCCAAGACCTTATTTTAGGTTATTCATCAATTGGCTGCTGGACTTATGTTCCTTGGATCCCGGGACTGATGGTGCAAACTTTCAGGTTCTATCAGCTTTTGCCAATGCATTCCACGCGTTGCAGCCTCTTAAGATTCCCGCCTTCAGCTTTGCATGGCTAGAACTGGTCAGCCACAGAAGCTTTATGCCCAAGCTACTTACAGTAAATGGCCAGAAAGGTTGGCCATATGTTCAACGCCTGCTGGTAGACTTGCTCCAGTTTCTTGAGCCATTTTTGAGAAATGCTGAACTCGGAGGACCAGTTAATTTCCTATACAAAGGGACACTGAGAGTGTTGCTGGTGCTGCTTCATGACTTTCCGGAGTTTCTCTGCGATTATCATTTTACTTTCTGCGATGTGATTCCTTCAAGTTGCATACAAATGCGAAATATTATTCTGAGTTCTTTTCCACGGAACATGAGGCTTCCAGATCCATCGACCCCAAATTTAAAGATTGATTTGCTGCCGGAGATAGTAGAAGCTCCATGTATCCTTTCTGAGGTTGATGCTGCGTTAAAAGCAAAGCAAATGAAGAATGACGTGGACGAGTATCTCGCTTTGAGGCAACAGAATTCAGCATACCTAAGTGAATTGAAGCAGAAGCTACTCCTGCCGTCCAGCGAGGCTAGCTCAGCTGGAACCCGTTACAGTGTACCATTGATCAACTCGCTTGTGCTATACACTGGAATTCAGGCTATTCAGCAGCTACAGGCGGGTGAGACACAGGCTCAAAATGTGGTGGCCTTGCACATGTTCAAGTATTTAAGTATGGAACTTGATACGGAAGGGCGGTACCTGTTCCTTAATGCAATCGCCAATCAGCTTCGATATCCCAACAACCACACCCATTACTTCTCCTTCATCATGCTCTATCTCTTCTTCGAGTCTGACCAGGAGATCGTACAGGAGCAGATAACAAGAGTGTTGCTGGAAAGGCTAATTGTGAACAGGCCGCATCCATGGGGACTCCTGATAACATTCATAGAGCTGATAAAGAATCCAAGATATGGCTTCTGGAAACAAGCCTTCATCAGGTGTGCGCCTGAGATTGAGAAACTCTTTGAATCTGTCGCCAGATCCTGTGGTGGTCTCAAGCCCCCTGACGAGGGAATGGTCTCCGGTTGGGTCTCGGACAACTCTCATTAG |
| Protein: MVMNPSKVAGHARFLLESFSDSEVDSIAQEICQLVEYGVETSIPVLKTCLDCFAARRSHPNTSQLEKLISLVFKRVLKHSNLISHALQDVEVTDEFVADLTNALDFSISDKISFALSLAESDDANAAGRNLLLAMIEQLCANSAQIESTEQVQNILLFLQTSEDLSTHLTSFLQILSSTQPKDDFSFALTPILSQQLHQADVLRSIDFHTEFDSILAEIDKEISVGDLMGELGCGVTADAQQCRDILSSFAPLTEATISRILANVARTCADLEDNHTTFSTFSLVLGCCIPTELSTPMSWSVDILIETIKQLQAPGTSWRKVIENLDHSGFDIPNKESFSFFMRLYKTASQDPFPLDAVCGSVWKNVEGQISFLKYAIASPPEVFTFMHSPRKLVYIDDNMHSHEHQLGLSNEAWLSLDLLDVLCQLAERGHTVLVSSLLQYPLAQCPKTLLTGMTHIKTAYNLIQREVVSAILPVIITNSQDSGFILNLWHQNTELVLWGILKAQNLKADRILNLIDICHELKVLSVVLESVPISFSIRLAVLASLRGYLDIENWLPNVLCVYKDLFAEECLKFVKNVHFSESEDFTSQHFHPSDPLSDVHLDATTSLLKVLKAHDNVITSSQLVDEIEKVNAAILDCNSKLQNGEAKVSSASNAYGDDIEAEANAYFHQMFSGQLSVDAMVQMLSRYKDSSVQREKSIFDCMIANLFEEYRFFPKYPERQLKIASILFGSVIKHQLISSLTLGMALRLVLDSLRKPADSKMFLFGSKALEQFVNRLVELPQYCNHILQISHLRSTHPELVTVIEQALSRISSGNLESEAVSNPGPSQSFPGNGEFSGSGIGQSALQLPLPVQSQQKNEVHINDNSRVPSVPSIEAKTLLPSSSTTSADVSVIPKNPGISTSSLTSAGIVRPARGATSTRFGSALNIETLVAAAERRENAIEIPPSDVQDKISFIINNISTANIESKGKEFAEILPQQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVDSKLLFKEILQNTYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNYVLRAREIDPKSLIVEAYEKGLMIAVIPFTSKVLEPCQMSIAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDLKEVAPTSLLKDRKREIDGNPDFSNKDLGVTHISQPQIIQEPKTISPLKQIDLPLDVADSPNTDDSSKLLSQYVAPQRVYTNTLMEDEKVSHLGLSDQLPSPQGLFPSTPSPLFSISQLSAALPNIGNHVVINQKLSGFALHFPFHRVVPLAMDRAIKEIVSGIVQRSVCVACQTTKELVLKDYTLEPDETRIYNAAHLMVASLAGSLAHVTCKEPLRTSISGHLRNSLQGMNIKNEALEQIVQLVTNDNLDLGCAAIEQAATEKAIQTIDADIDQQLSLRKKHRDGAGSSLFDPNMLSQNSVSFIPESLRPKPGHLSLSQQRVYEDFVQLPWQKQTTQTSHGLSAASSSSGDVGLSSSYGPASGKSASDFLSSARNARMDNVSQPLDISVEGFESPPVSLLSSQVDPAVDTAGLQFSKSLSTSELSLVESSDTAMKETGASLQTLTSAATMERLGGNNIIQPSLSTRDALEKYHIVTQKMEDLVANIAGDDEIQAVVSEVPEIILRCISRDEAALAVAQKAFKALYDNASSNLHVSANLAILVAVRDVCKRVVKELTSWVIYSEEERKLNKDITIGLIQRELLNLAEYNVHMAKYLDGGRNKSATDFSISLLQSLVTEESSVISELHSLVDALAKLSSKYGSPESLQQLIDIIRNPVTNTSDHSNSAIGIENNDKQSKDKKVVCNTTANTEENTNLEFVESESAGFRSRVSTLFESWYQICEVSGANETACSQYVLHLHETGLLKGDNTTESFFRILLELSVAHCISSEEISSGAVQSPQQAQSPSFLIIDIYAKLVFSILKYLPEQESSSKLFLLSEIMAVTVRSIQKDAEDKKTSLNPRPYFRLFINWLLDLCSLDPGTDGANFQVLSAFANAFHALQPLKIPAFSFAWLELVSHRSFMPKLLTVNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGPVNFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPSSCIQMRNIILSSFPRNMRLPDPSTPNLKIDLLPEIVEAPCILSEVDAALKAKQMKNDVDEYLALRQQNSAYLSELKQKLLLPSSEASSAGTRYSVPLINSLVLYTGIQAIQQLQAGETQAQNVVALHMFKYLSMELDTEGRYLFLNAIANQLRYPNNHTHYFSFIMLYLFFESDQEIVQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYGFWKQAFIRCAPEIEKLFESVARSCGGLKPPDEGMVSGWVSDNSH |